BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028B07SP1|AL428852
(908 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1777 1766 0.0
>3x_Contig1777
Length = 26319
Score = 1766 bits (891), Expect = 0.0
Identities = 898/899 (99%), Gaps = 1/899 (0%)
Strand = Plus / Minus
Query: 1 gatcccatacgctttcatccacttcggtttctttgctctaggttttgctgttccattcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18698 gatcccatacgctttcatccacttcggtttctttgctctaggttttgctgttccattcat 18639
Query: 61 ctcttcttacgtgcaattgaagaagtttggtgctttctaaatgagtggatagaaataaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18638 ctcttcttacgtgcaattgaagaagtttggtgctttctaaatgagtggatagaaataaat 18579
Query: 121 ttcctgccctctttgttatatcgtatcctttcacaataattttcgttttattttcatgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18578 ttcctgccctctttgttatatcgtatcctttcacaataattttcgttttattttcatgtc 18519
Query: 181 atcattgctacacattccatccatctgcaaatgtccgcactattgcagccagccggcgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18518 atcattgctacacattccatccatctgcaaatgtccgcactattgcagccagccggcgaa 18459
Query: 241 catattctattctattacttgatgaataatgaatagtcagtccgaggtttaaagaaaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18458 catattctattctattacttgatgaataatgaatagtcagtccgaggtttaaagaaaata 18399
Query: 301 ccaagcacatcacaataaccaaaaccagacagcaaaatagaatattactcaactcttcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18398 ccaagcacatcacaataaccaaaaccagacagcaaaatagaatattactcaactcttcat 18339
Query: 361 ttcacatttatttatctctcgagagtgatgtatacctgcactcgtcgaaatcaaaaacta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18338 ttcacatttatttatctctcgagagtgatgtatacctgcactcgtcgaaatcaaaaacta 18279
Query: 421 aagcaacggttcgaagcaatctgaagctaaagttgaaattagtgacttcatcgacacttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18278 aagcaacggttcgaagcaatctgaagctaaagttgaaattagtgacttcatcgacacttt 18219
Query: 481 gacgagactcatgcaaacaaaaaatcacaaacagataacaaaggaattaacattatcata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18218 gacgagactcatgcaaacaaaaaatcacaaacagataacaaaggaattaacattatcata 18159
Query: 541 ctcctggaccgttcgtgagatctaataataatcttaaaagaaaaatagcacaagagataa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18158 ctcctggaccgttcgtgagatctaataataatcttaaaagaaaaatagcacaagagataa 18099
Query: 601 gtggatttggaatcaagtttcaccgggagtcttcaatcgtttccctcatttttttctatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18098 gtggatttggaatcaagtttcaccgggagtcttcaatcgtttccctcatttttttctatc 18039
Query: 661 ttccgactatcagctcaaagaaatactatattatcaacatgaaatactgtcagaaacatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18038 ttccgactatcagctcaaagaaatactatattatcaacatgaaatactgtcagaaacatc 17979
Query: 721 atttatttttatcaatatgtttaaatttaaacgtataggtctttaattaacagaaattca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17978 atttatttttatcaatatgtttaaatttaaacgtataggtctttaattaacagaaattca 17919
Query: 781 aaaaacgtcaaaatcagcttatttatcaactgacaaatatttaatcatttcttaaattta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17918 aaaaacgtcaaaatcagcttatttatcaactgacaaatatttaatcatttcttaaattta 17859
Query: 841 ttgtttctcgattgtgccgtggtgttattcctcgacgggaat-ccgttgtagtttgaga 898
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 17858 ttgtttctcgattgtgccgtggtgttattcctcgacgggaatcccgttgtagtttgaga 17800
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8823
Number of Sequences: 1807
Number of extensions: 8823
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 908
length of database: 10,358,551
effective HSP length: 16
effective length of query: 892
effective length of database: 10,329,639
effective search space: 9214037988
effective search space used: 9214037988
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)